ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2gruA2 - ECOD Domain | ECOD

ECOD/Domains/e2gruA2

e2gruA2

UID: 000319479

PDB

Range: A:2-172
PDB: 2GRU chain A(all domains)
UniProt: Q9S5E2 (all domains)
Gene: btrC

Molecule: 2-deoxy-scyllo-inosose synthase

3D Structure

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Related Domains

Browse other domains in DHQ_synthase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupRossmann-like domain in dehydroquinate synthase-like enzymes(2007.1.7)

FFamilyDHQ_synthase(2007.1.7.2)

Ligands

in contact, ≤ 4 Å

NadideNAD
drugDrugBank DB14128
[(1R,2R,3S,4S,5R)-2,3,4,5-TETRAHYDROXYCYCLOHEXYL]METHYL DIHYDROGEN PHOSPHATECAK
COBALT (II) IONCO

Pfam Families

PF01761DHQ_synthase

3-dehydroquinate synthase N-terminal

ClanCL0224DHQS

External Links

ECOD PDB View: 2GRU RCSB PDB: 2GRU PDBe: 2GRU UniProt: Q9S5E2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

(1R,2S,3S,4R)-5-METHYLENECYCLOHEXANE-1,2,3,4-TETRAOLEXO

+ 2 additives ((4r)-2-Methylpentane-2,4-Diol, Phosphate ion)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564
Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.