ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1xe8B1 - ECOD Domain | ECOD

ECOD/Domains/e1xe8B1

e1xe8B1

UID: 000031979

PDB

Range: B:9-202
PDB: 1XE8 chain B(all domains)
UniProt: Q03629 (all domains)
Gene: YML079W

Molecule: Hypothetical 22.5 kDa protein in TUB1-CPR3 intergenic region

3D Structure

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Related Domains

Browse other domains in Cupin_5 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyCupin_5(10.12.1.31)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Citric acid)

Citric acidCIT
DrugBank DB04272

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF06172Cupin_5

Cupin superfamily (DUF985)

ClanCL0029Cupin

External Links

ECOD PDB View: 1XE8 RCSB PDB: 1XE8 PDBe: 1XE8 UniProt: Q03629

Downloads

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