ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2op4H1 - ECOD Domain | ECOD

ECOD/Domains/e2op4H1

e2op4H1

UID: 000320019

PDB

Range: H:1-113
PDB: 2OP4 chain H(all domains)
UniProt: Q5BJZ2 (all domains)
Gene: LOC367586

Molecule: Murine Antibody Fab RS2-1G9 IGG1 Heavy Chain

3D Structure

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Related Domains

Browse other domains in V-set →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyV-set(11.1.1.99)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Immunoglobulin V-set domain

ClanCL0159E-set

External Links

ECOD PDB View: 2OP4 RCSB PDB: 2OP4 PDBe: 2OP4 UniProt: Q5BJZ2

Downloads

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