ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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G5EGQ9_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/G5EGQ9_F1_nD3

G5EGQ9_F1_nD3

UID: 003214949

AlphaFold

Range: 391-540,776-815
AlphaFold: AF-G5EGQ9
UniProt: G5EGQ9 (all domains)
Gene: nmr-1

Protein: LITAF domain-containing protein (NMDA-type ionotropic glutamate receptor NMR-1)

3D Structure

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Related Domains

Browse other domains in SBP_bac_3, Lig_chan-Glu_bd →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilySBP_bac_3, Lig_chan-Glu_bd(7523.1.1.52)

Pfam Families

PF00497SBP_bac_3

Bacterial extracellular solute-binding proteins, family 3

ClanCL0177PBP

PF10613Lig_chan-Glu_bd

Ligated ion channel L-glutamate- and glycine-binding site

ClanCL0177PBP

External Links

AlphaFold DB: G5EGQ9 UniProt: G5EGQ9

Representative

This domain is classified based on similarity to:

Downloads

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Domain coordinates: residues 391-540,776-815