ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2pdrD1 - ECOD Domain | ECOD

ECOD/Domains/e2pdrD1

e2pdrD1

UID: 000321513

PDB

Range: D:38-184
PDB: 2PDR chain D(all domains)
UniProt: Q9C3Y6 (all domains)
Gene: vvd

Molecule: Vivid PAS protein VVD

3D Structure

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Related Domains

Browse other domains in PAS_9 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupProfilin-like(223)

HH-groupsensor domains(223.1)

TT-groupsensor domains(223.1.1)

FFamilyPAS_9(223.1.1.25)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PAS domain

ClanCL0183PAS_Fold

External Links

ECOD PDB View: 2PDR RCSB PDB: 2PDR PDBe: 2PDR UniProt: Q9C3Y6

Downloads

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