ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2e76C1 - ECOD Domain | ECOD

ECOD/Domains/e2e76C1

e2e76C1

UID: 000321664

PDB

Range: C:1-169,C:232-250
PDB: 2E76 chain C(all domains)
UniProt: P83793 (all domains)
Gene: petA

Molecule: Apocytochrome f

3D Structure

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Related Domains

Browse other domains in Apocytochr_F_N →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupCommon fold of diphtheria toxin/transcription factors/cytochrome f(11.1.5)

FFamilyApocytochr_F_N(11.1.5.46)

Ligands

in contact, ≤ 4 Å

FerrohemeHEM
drugDrugBank DB18267within 5 Å only
Cadmium ionCD
metal
(7R,17E)-4-HYDROXY-N,N,N,7-TETRAMETHYL-7-[(8E)-OCTADEC-8-ENOYLOXY]-10-OXO-3,5,9-TRIOXA-4-PHOSPHAHEPTACOS-17-EN-1-AMINIUM 4-OXIDE

Pfam Families

PF16639Apocytochr_F_N

Apocytochrome F, N-terminal

External Links

ECOD PDB View: 2E76 RCSB PDB: 2E76 PDBe: 2E76 UniProt: P83793

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.