ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2jdmB1 - ECOD Domain | ECOD

ECOD/Domains/e2jdmB1

e2jdmB1

UID: 000321770

PDB

Range: B:1-114
PDB: 2JDM chain B(all domains)
UniProt: Q9HYN5 (all domains)
Gene: lecB

Molecule: FUCOSE-BINDING LECTIN PA-IIL

3D Structure

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Related Domains

Browse other domains in PA-IIL →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupCalcium-mediated lectin(10.6)

TT-groupCalcium-mediated lectin(10.6.1)

FFamilyPA-IIL(10.6.1.1)

Ligands

in contact, ≤ 4 Å

alpha-L-fucoseFUC
drugDrugBank DB04473
alpha-L-methyl-fucoseMFU
drugDrugBank DB03879

Pfam Families

Fucose-binding lectin II (PA-IIL)

External Links

ECOD PDB View: 2JDM RCSB PDB: 2JDM PDBe: 2JDM UniProt: Q9HYN5

Downloads

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Calcium ion

metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.