ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1vkeA1 - ECOD Domain | ECOD

ECOD/Domains/e1vkeA1

e1vkeA1

UID: 000003227

RepresentativePDB

Range: A:4-121
PDB: 1VKE chain A(all domains)
UniProt: Q9X1V5 (all domains)
Gene: TM_1620

Molecule: carboxymuconolactone decarboxylase family protein

3D Structure

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Related Domains

Browse other domains in CMD →

Classification

AArchitecturealpha arrays(a.6)

XX-groupAhpD-like(608)

HH-groupAhpD-like(608.1)

TT-groupAhpD-like(608.1.1)

FFamilyCMD(608.1.1.1)

Ligands

in contact, ≤ 4 Å

Unknown ligandUNL

+ 1 additive ((4r)-2-Methylpentane-2,4-Diol)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Carboxymuconolactone decarboxylase family

ClanCL0423AhpD-like

External Links

ECOD PDB View: 1VKE RCSB PDB: 1VKE PDBe: 1VKE UniProt: Q9X1V5

Downloads

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