ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2pgzB1 - ECOD Domain | ECOD

ECOD/Domains/e2pgzB1

e2pgzB1

UID: 000323066

PDB

Range: B:-5-213
PDB: 2PGZ chain B(all domains)
UniProt: Q8WSF8 (all domains)
Gene: LOC100533247

Molecule: Soluble acetylcholine receptor

3D Structure

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Related Domains

Browse other domains in Neur_chan_LBD →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupNicotinic receptor ligand binding domain-like(11.12)

TT-groupNicotinic receptor ligand binding domain-like(11.12.1)

FFamilyNeur_chan_LBD(11.12.1.1)

Ligands

in contact, ≤ 4 Å

CocaineCOC
drugDrugBank DB00907
N-AcetylglucosamineNAG
drugDrugBank DB00141

+ 1 additive (Tetraethylene glycol)

Pfam Families

PF02931Neur_chan_LBD

Neurotransmitter-gated ion-channel ligand binding domain

ClanCL0974NLGIC_lig-bind

External Links

ECOD PDB View: 2PGZ RCSB PDB: 2PGZ PDBe: 2PGZ UniProt: Q8WSF8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.