ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2obeB1 - ECOD Domain | ECOD

ECOD/Domains/e2obeB1

e2obeB1

UID: 000324222

PDB

Range: B:5-594
PDB: 2OBE chain B(all domains)
UniProt: Q8UY79 (all domains)
Gene: L3

Molecule: Hexon protein

3D Structure

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Related Domains

Browse other domains in Adeno_hexon →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyAdeno_hexon(10.2.1.17)

Ligands

in contact, ≤ 4 Å

Dihydrogenphosphate2HP
drugDrugBank DB02831

+ 1 additive ((4r)-2-Methylpentane-2,4-Diol)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564

Pfam Families

PF01065Adeno_hexon

Hexon, adenovirus major coat protein, N-terminal domain

ClanCL0611Hexon

External Links

ECOD PDB View: 2OBE RCSB PDB: 2OBE PDBe: 2OBE UniProt: Q8UY79

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.