ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2pz8B1 - ECOD Domain | ECOD

ECOD/Domains/e2pz8B1

e2pz8B1

UID: 000324524

PDB

Range: B:1-280
PDB: 2PZ8 chain B(all domains)
UniProt: Q81RP3 (all domains)
Gene: nadE

Molecule: NH(3)-dependent NAD(+) synthetase

3D Structure

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Related Domains

Browse other domains in NAD_synthase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHUP domain-like(2005)

HH-groupHUP domains(2005.1)

TT-groupHUP domains(2005.1.1)

FFamilyNAD_synthase(2005.1.1.18)

Ligands

in contact, ≤ 4 Å

alpha,beta-Methyleneadenosine 5'-triphosphateAPC
drugDrugBank DB02596
Magnesium ionMG
metal

+ 1 additive (Glycerin)

Pfam Families

PF02540NAD_synthase

NAD synthase

ClanCL0039HUP

External Links

ECOD PDB View: 2PZ8 RCSB PDB: 2PZ8 PDBe: 2PZ8 UniProt: Q81RP3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

GlycerinGOL

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.