ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q55F60_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q55F60_F1_nD3

Q55F60_F1_nD3

UID: 003250950

AlphaFold

Range: 466-520,546-775
AlphaFold: AF-Q55F60
UniProt: Q55F60 (all domains)
Gene: DDB_G0268244

Protein: mRNA decay factor PAT1 domain-containing protein

3D Structure

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Related Domains

Browse other domains in PAT1 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyPAT1(109.4.1.138)

Pfam Families

Topoisomerase II-associated protein PAT1

ClanCL0020TPR

External Links

AlphaFold DB: Q55F60 UniProt: Q55F60

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 466-520,546-775