ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q54EP3_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q54EP3_F1_nD1

Q54EP3_F1_nD1

UID: 003252416

AlphaFold

Range: 6-125
AlphaFold: AF-Q54EP3
UniProt: Q54EP3 (all domains)
Gene: pop5

Protein: Probable ribonuclease P/MRP protein subunit POP5 (EC 3.1.26.5)

3D Structure

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Related Domains

Browse other domains in RNase_P_Rpp14 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRpp14/Pop5-like(304.57)

TT-groupRpp14/Pop5-like(304.57.1)

FFamilyRNase_P_Rpp14(304.57.1.1)

Pfam Families

PF01900RNase_P_Rpp14

Rpp14/Pop5 family

ClanCL0734Rpp14-Pop5-like

External Links

AlphaFold DB: Q54EP3 UniProt: Q54EP3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-125