ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q54ZD0_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q54ZD0_F1_nD3

Q54ZD0_F1_nD3

UID: 003260381

AlphaFold

Range: 96-210
AlphaFold: AF-Q54ZD0
UniProt: Q54ZD0 (all domains)
Gene: pth2

Protein: Probable peptidyl-tRNA hydrolase 2 (PTH 2) (EC 3.1.1.29)

3D Structure

Loading viewer...

Related Domains

Browse other domains in PTH2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeptidyl-tRNA hydrolase II(2501)

HH-groupPeptidyl-tRNA hydrolase II(2501.1)

TT-groupPeptidyl-tRNA hydrolase II(2501.1.1)

FFamilyPTH2(2501.1.1.1)

Pfam Families

Peptidyl-tRNA hydrolase PTH2

ClanCL0305PTH2

External Links

AlphaFold DB: Q54ZD0 UniProt: Q54ZD0

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 96-210