ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2d0gA1 - ECOD Domain | ECOD

ECOD/Domains/e2d0gA1

e2d0gA1

UID: 000032611

PDB

Range: A:1-122
PDB: 2D0G chain A(all domains)
UniProt: Q60053 (all domains)
Gene: tvaI

Molecule: alpha-amylase I

3D Structure

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Related Domains

Browse other domains in Alpha-amylase_N →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyAlpha-amylase_N(11.1.1.46)

Ligands

in contact, ≤ 4 Å

Beta-D-GlucoseBGC
drugDrugBank DB02379within 5 Å only
Calcium ionCA
metal
alpha-D-glucopyranoseGLC

Pfam Families

PF02903Alpha-amylase_N

Alpha amylase, N-terminal ig-like domain

ClanCL0159E-set

External Links

ECOD PDB View: 2D0G RCSB PDB: 2D0G PDBe: 2D0G UniProt: Q60053

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

within 5 Å only

+ 1 additive ((4r)-2-Methylpentane-2,4-Diol)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.