ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2v8pB2 - ECOD Domain | ECOD

ECOD/Domains/e2v8pB2

e2v8pB2

UID: 000326135

PDB

Range: B:-1-153
PDB: 2V8P chain B(all domains)
UniProt: O67060 (all domains)
Gene: ispE

Molecule: 4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL KINASE

3D Structure

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Related Domains

Browse other domains in GHMP_kinases_N →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRibosomal protein S5 domain 2-like(212)

HH-groupRibosomal protein S5 domain 2-like(212.1)

TT-groupRibosomal protein S5 domain 2-like(212.1.1)

FFamilyGHMP_kinases_N(212.1.1.3)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
Cytidine-5'-DiphosphateCDP
drugDrugBank DB04555

Shown in the structure viewer.

Pfam Families

PF00288GHMP_kinases_N

GHMP kinases N terminal domain

ClanCL0329S5

External Links

ECOD PDB View: 2V8P RCSB PDB: 2V8P PDBe: 2V8P UniProt: O67060

Downloads

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Drug annotations from DrugDomain.