ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q54R45_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q54R45_F1_nD1

Q54R45_F1_nD1

UID: 003267043

AlphaFold

Range: 36-185
AlphaFold: AF-Q54R45
UniProt: Q54R45 (all domains)
Gene: ssr1

Protein: Translocon-associated protein subunit alpha (TRAP-alpha) (Signal sequence receptor subunit alpha) (SSR-alpha)

3D Structure

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Related Domains

Browse other domains in TRAP_alpha →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyTRAP_alpha(11.1.1.63)

Pfam Families

PF03896TRAP_alpha

Translocon-associated protein (TRAP), alpha subunit

ClanCL0159E-set

External Links

AlphaFold DB: Q54R45 UniProt: Q54R45

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 36-185