ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q54NA0_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q54NA0_F1_nD2

Q54NA0_F1_nD2

UID: 003267887

AlphaFold

Range: 96-195,326-780
AlphaFold: AF-Q54NA0
UniProt: Q54NA0 (all domains)
Gene: nup85

Protein: Nuclear pore complex protein nup85 (Nucleoporin nup85)

3D Structure

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Related Domains

Browse other domains in Nucleopor_Nup85 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupNucleoporin NUP85/Nucleoporin NUP145 C-terminal domain(109.21)

TT-groupNucleoporin NUP85/Nucleoporin NUP145 C-terminal domain(109.21.1)

FFamilyNucleopor_Nup85(109.21.1.1)

Pfam Families

PF07575Nucleopor_Nup85

Nup85 Nucleoporin

ClanCL0020TPR

External Links

AlphaFold DB: Q54NA0 UniProt: Q54NA0

Representative

This domain is classified based on similarity to:

Downloads

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Domain coordinates: residues 96-195,326-780