ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2hvwB1 - ECOD Domain | ECOD

ECOD/Domains/e2hvwB1

e2hvwB1

UID: 000326862

PDB

Range: B:4-149
PDB: 2HVW chain B(all domains)
UniProt: Q8DSE5 (all domains)
Gene: comEB

Molecule: deoxycytidylate deaminase

3D Structure

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Related Domains

Browse other domains in dCMP_cyt_deam_1 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupCytidine deaminase-like(2492)

HH-groupCytidine deaminase-like(2492.1)

TT-groupCytidine deaminase-like(2492.1.1)

FFamilydCMP_cyt_deam_1(2492.1.1.1)

Ligands

in contact, ≤ 4 Å

2'-Deoxycytidine 5'-triphosphateDCP
drugDrugBank DB03258
3,4-Dihydro-2'-deoxyuridine-5'-monophosphateDDN
drugDrugBank DB04280

Pfam Families

PF00383dCMP_cyt_deam_1

Cytidine and deoxycytidylate deaminase zinc-binding region

ClanCL0109CDA

External Links

ECOD PDB View: 2HVW RCSB PDB: 2HVW PDBe: 2HVW UniProt: Q8DSE5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Zinc ionZN

metal

Magnesium ionMG

metalwithin 5 Å only

+ 1 additive (1,4-Dioxane)

1,4-DioxaneDIO
DrugBank DB03316

Shown in the structure viewer. Drug annotations from DrugDomain.