ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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K0EKK3_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/K0EKK3_F1_nD4

K0EKK3_F1_nD4

UID: 003291609

AlphaFold

Range: 356-570
AlphaFold: AF-K0EKK3
UniProt: K0EKK3 (all domains)
Gene: lysS

Protein: Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)

3D Structure

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Related Domains

Browse other domains in LPG_synthase_C →

Classification

AArchitecturea+b three layers(a.12)

XX-groupNat/Ivy(213)

HH-groupAcyl-CoA N-acyltransferases (Nat)(213.1)

TT-groupAcyl-CoA N-acyltransferases (Nat)(213.1.1)

FFamilyLPG_synthase_C(213.1.1.21)

Pfam Families

PF09924LPG_synthase_C

Phosphatidylglycerol lysyltransferase, C-terminal

ClanCL0257Acetyltrans

External Links

AlphaFold DB: K0EKK3 UniProt: K0EKK3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 356-570