ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2rd9B1 - ECOD Domain | ECOD

ECOD/Domains/e2rd9B1

e2rd9B1

UID: 000329325

PDB

Range: B:1-174
PDB: 2RD9 chain B(all domains)
UniProt: Q9KGB8 (all domains)
Gene: BH0186

Molecule: BH0186 protein

3D Structure

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Related Domains

Browse other domains in DinB_2 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupYfiT-like putative metal-dependent hydrolases(620)

HH-groupYfiT-like putative metal-dependent hydrolases(620.1)

TT-groupYfiT-like putative metal-dependent hydrolases(620.1.1)

FFamilyDinB_2(620.1.1.6)

Ligands

in contact, ≤ 4 Å

NICKEL (II) IONNI
metal

+ 2 additives (Glycerin, Imidazole)

GlycerinGOL
DrugBank DB09462
Imidazole

Pfam Families

DinB superfamily

ClanCL0310DinB

External Links

ECOD PDB View: 2RD9 RCSB PDB: 2RD9 PDBe: 2RD9 UniProt: Q9KGB8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB03366

Shown in the structure viewer. Drug annotations from DrugDomain.