ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2re9A1 - ECOD Domain | ECOD

ECOD/Domains/e2re9A1

e2re9A1

UID: 000329362

PDB

Range: A:17-180
PDB: 2RE9 chain A(all domains)
UniProt: O95150 (all domains)
Gene: TNFSF15

Molecule: TNF superfamily ligand TL1A

3D Structure

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Related Domains

Browse other domains in TNF →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupTNF-like(10.3)

TT-groupTNF-like(10.3.1)

FFamilyTNF(10.3.1.1)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metalwithin 5 Å only

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer.

Pfam Families

TNF(Tumour Necrosis Factor) family

ClanCL0100C1q_TNF

External Links

ECOD PDB View: 2RE9 RCSB PDB: 2RE9 PDBe: 2RE9 UniProt: O95150

Downloads

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Drug annotations from DrugDomain.