ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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I1JJK1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/I1JJK1_F1_nD1

I1JJK1_F1_nD1

UID: 003296661

AlphaFold

Range: 66-235
AlphaFold: AF-I1JJK1
UniProt: I1JJK1 (all domains)
Gene: LOC100779327

Protein: 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) (16S rRNA m5C967 methyltransferase) (rRNA (cytosine-C(5)-)-methyltransferase RsmB)

3D Structure

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Related Domains

Browse other domains in NusB →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupNusB-like(195)

HH-groupNusB-like(195.1)

TT-groupNusB-like(195.1.1)

FFamilyNusB(195.1.1.1)

Pfam Families

NusB family

ClanCL0633NusB

External Links

AlphaFold DB: I1JJK1 UniProt: I1JJK1

Representative

This domain is classified based on similarity to:

Downloads

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Domain coordinates: residues 66-235