ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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I1KPB4_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/I1KPB4_F1_nD3

I1KPB4_F1_nD3

UID: 003297819

AlphaFold

Range: 326-555
AlphaFold: AF-I1KPB4
UniProt: I1KPB4 (all domains)
Gene: LOC100776096

Protein: UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic

3D Structure

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Related Domains

Browse other domains in Mur_ligase_M →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyMur_ligase_M(2004.1.1.159)

Pfam Families

PF08245Mur_ligase_M

Mur ligase middle domain

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: I1KPB4 UniProt: I1KPB4

Representative

This domain is classified based on similarity to:

Downloads

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Domain coordinates: residues 326-555