ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2pidB1 - ECOD Domain | ECOD

ECOD/Domains/e2pidB1

e2pidB1

UID: 000329928

PDB

Range: B:37-373
PDB: 2PID chain B(all domains)
UniProt: Q9Y2Z4 (all domains)
Gene: YARS2

Molecule: Tyrosyl-tRNA synthetase

3D Structure

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Related Domains

Browse other domains in tRNA-synt_1b →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHUP domain-like(2005)

HH-groupHUP domains(2005.1)

TT-groupHUP domains(2005.1.1)

FFamilytRNA-synt_1b(2005.1.1.2)

Ligands

in contact, ≤ 4 Å

TyrosyladenylateYSA
drugDrugBank DB03325

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00579tRNA-synt_1b

tRNA synthetases class I (W and Y)

ClanCL0039HUP

External Links

ECOD PDB View: 2PID RCSB PDB: 2PID PDBe: 2PID UniProt: Q9Y2Z4

Downloads

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