ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2vfwB1 - ECOD Domain | ECOD

ECOD/Domains/e2vfwB1

e2vfwB1

UID: 000331381

PDB

Range: B:30-256
PDB: 2VFW chain B(all domains)
UniProt: P9WFF5 (all domains)
Gene: Rv1086

Molecule: SHORT-CHAIN Z-ISOPRENYL DIPHOSPHATE SYNTHETASE

3D Structure

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Related Domains

Browse other domains in Prenyltransf →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupUndecaprenyl diphosphate synthase(7534)

HH-groupUndecaprenyl diphosphate synthase(7534.1)

TT-groupUndecaprenyl diphosphate synthase(7534.1.1)

FFamilyPrenyltransf(7534.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01255Prenyltransf

Putative undecaprenyl diphosphate synthase

External Links

ECOD PDB View: 2VFW RCSB PDB: 2VFW PDBe: 2VFW UniProt: P9WFF5

Downloads

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