ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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I1MPU8_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/I1MPU8_F1_nD2

I1MPU8_F1_nD2

UID: 003318664

RepresentativeAlphaFold

Range: 931-1095
AlphaFold: AF-I1MPU8
UniProt: I1MPU8 (all domains)
Gene: LOC102659840

Protein: Protein SHORTAGE IN CHIASMATA 1

3D Structure

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Related Domains

Browse other domains in SHOC1_PDDEXK_dom →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilySHOC1_PDDEXK_dom(2008.1.1.151)

Pfam Families

PF28664SHOC1_PDDEXK_dom

SHOC1 PDDEXK domain

ClanCL0236PDDEXK

External Links

AlphaFold DB: I1MPU8 UniProt: I1MPU8

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 931-1095