ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1jyvB2 - ECOD Domain | ECOD

ECOD/Domains/e1jyvB2

e1jyvB2

UID: 000033304

PDB

Range: B:220-333
PDB: 1JYV chain B(all domains)
UniProt: P00722 (all domains)
Gene: lacZ

Molecule: Beta-Galactosidase

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_2 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyGlyco_hydro_2(11.1.1.14)

Ligands

in contact, ≤ 4 Å

1-O-[O-Nitrophenyl]-Beta-D-Galactopyranose145
drugDrugBank DB01920

+ 1 additive (Dimethyl sulfoxide)

Dimethyl sulfoxideDMS
DrugBank DB01093

Pfam Families

PF00703Glyco_hydro_2

Glycosyl hydrolases family 2

ClanCL0159E-set

External Links

ECOD PDB View: 1JYV RCSB PDB: 1JYV PDBe: 1JYV UniProt: P00722

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.