ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2v2bA1 - ECOD Domain | ECOD

ECOD/Domains/e2v2bA1

e2v2bA1

UID: 000334268

PDB

Range: A:2-273
PDB: 2V2B chain A(all domains)
UniProt: P32169 (all domains)
Gene: rhaD

Molecule: RHAMNULOSE-1-PHOSPHATE ALDOLASE

3D Structure

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Related Domains

Browse other domains in Aldolase_II →

Classification

AArchitecturea+b three layers(a.12)

XX-groupAraD-like aldolase/epimerase(281)

HH-groupAraD-like aldolase/epimerase(281.1)

TT-groupAraD-like aldolase/epimerase(281.1.1)

FFamilyAldolase_II(281.1.1.1)

Ligands

in contact, ≤ 4 Å

(R)-Propylene glycolPGR
drugDrugBank DB02159
Zinc ionZN
metal

+ 2 additives (Acetate, Phosphate ion)

Pfam Families

PF00596Aldolase_II

Class II Aldolase and Adducin N-terminal domain

ClanCL0898AraD-like

External Links

ECOD PDB View: 2V2B RCSB PDB: 2V2B PDBe: 2V2B UniProt: P32169

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

AcetateACT

DrugBank DB14511

Phosphate ionPO4

DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.