ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2v9nB1 - ECOD Domain | ECOD

ECOD/Domains/e2v9nB1

e2v9nB1

UID: 000334674

PDB

Range: B:1-274
PDB: 2V9N chain B(all domains)
UniProt: P32169 (all domains)
Gene: rhaD

Molecule: RHAMNULOSE-1-PHOSPHATE ALDOLASE

3D Structure

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Related Domains

Browse other domains in Aldolase_II →

Classification

AArchitecturea+b three layers(a.12)

XX-groupAraD-like aldolase/epimerase(281)

HH-groupAraD-like aldolase/epimerase(281.1)

TT-groupAraD-like aldolase/epimerase(281.1.1)

FFamilyAldolase_II(281.1.1.1)

Ligands

in contact, ≤ 4 Å

(S)-propane-1,2-diolPGO
drugDrugBank DB04349
Zinc ionZN
metal

+ 3 additives (Citric acid, Glycerin, Phosphate ion)

Pfam Families

PF00596Aldolase_II

Class II Aldolase and Adducin N-terminal domain

ClanCL0898AraD-like

External Links

ECOD PDB View: 2V9N RCSB PDB: 2V9N PDBe: 2V9N UniProt: P32169

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Citric acidCIT

DrugBank DB04272

GlycerinGOL

DrugBank DB09462

Phosphate ionPO4

DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.