ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1ppjD1 - ECOD Domain | ECOD

ECOD/Domains/e1ppjD1

e1ppjD1

UID: 000003347

RepresentativePDB

Range: D:1-195
PDB: 1PPJ chain D(all domains)
UniProt: P00125 (all domains)
Gene: CYC1

Molecule: Cytochrome c1, heme protein, mitochondrial

3D Structure

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Related Domains

Browse other domains in Cytochrom_C1 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupCytochrome c-like(107)

HH-groupCytochrome c(107.1)

TT-groupCytochrome c(107.1.1)

FFamilyCytochrom_C1(107.1.1.2)

Ligands

in contact, ≤ 4 Å

Ferroheme CHEC
drugDrugBank DB03317
Azide ionAZI
within 5 Å only
hexyl beta-D-glucopyranosideJZR

Pfam Families

PF02167Cytochrom_C1

Cytochrome C1 family

ClanCL0318Cytochrome-c

External Links

ECOD PDB View: 1PPJ RCSB PDB: 1PPJ PDBe: 1PPJ UniProt: P00125

Downloads

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within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.