ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2vdjA1 - ECOD Domain | ECOD

ECOD/Domains/e2vdjA1

e2vdjA1

UID: 000335139

PDB

Range: A:17-296
PDB: 2VDJ chain A(all domains)
UniProt: Q72X44 (all domains)
Gene: metAA

Molecule: HOMOSERINE O-SUCCINYLTRANSFERASE

3D Structure

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Related Domains

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Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupClass I glutamine amidotransferase-like(2007.1.1)

FFamilyHTS(2007.1.1.7)

Ligands

in contact, ≤ 4 Å

L-HomoserineHSE
drugDrugBank DB04193

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

Homoserine O-succinyltransferase

ClanCL0014Glutaminase_I

External Links

ECOD PDB View: 2VDJ RCSB PDB: 2VDJ PDBe: 2VDJ UniProt: Q72X44

Downloads

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Drug annotations from DrugDomain.