ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2vk7B1 - ECOD Domain | ECOD

ECOD/Domains/e2vk7B1

e2vk7B1

UID: 000335184

PDB

Range: B:1243-1691
PDB: 2VK7 chain B(all domains)
UniProt: Q59310 (all domains)
Gene: nanH

Molecule: EXO-ALPHA-SIALIDASE

3D Structure

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Related Domains

Browse other domains in BNR, BNR_3 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group6-bladed(5.1.3)

FFamilyBNR, BNR_3(5.1.3.143)

Ligands

in contact, ≤ 4 Å

5-(acetylamino)-3,5-dideoxy-3-fluoro-D-erythro-alpha-L-manno-non-2-ulopyranosonic acidFSI
drugDrugBank DB04211
Calcium ionCA
metal

Shown in the structure viewer.

Pfam Families

BNR/Asp-box repeat

ClanCL0186Beta_propeller

BNR repeat-like domain

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 2VK7 RCSB PDB: 2VK7 PDBe: 2VK7 UniProt: Q59310

Downloads

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Drug annotations from DrugDomain.