ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2rkaA2 - ECOD Domain | ECOD

ECOD/Domains/e2rkaA2

e2rkaA2

UID: 000335372

PDB

Range: A:4-259
PDB: 2RKA chain A(all domains)
UniProt: P07379 (all domains)
Gene: Pck1

Molecule: Phosphoenolpyruvate carboxykinase, cytosolic [GTP]

3D Structure

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Related Domains

Browse other domains in PEPCK_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupPEP carboxykinase N-terminal domain(2004.11)

TT-groupPEP carboxykinase N-terminal domain(2004.11.1)

FFamilyPEPCK_N(2004.11.1.2)

Ligands

in contact, ≤ 4 Å

2-Phosphoglycolic AcidPGA
drugDrugBank DB02726
MANGANESE (II) IONMN
metal
Sodium ionNA
metal

Shown in the structure viewer.

Pfam Families

PF17297PEPCK_N

Phosphoenolpyruvate carboxykinase N-terminal domain

External Links

ECOD PDB View: 2RKA RCSB PDB: 2RKA PDBe: 2RKA UniProt: P07379

Downloads

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Drug annotations from DrugDomain.