ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e2qfdG1 - ECOD Domain | ECOD

ECOD/Domains/e2qfdG1

e2qfdG1

UID: 000336074

PDB

Range: G:803-923
PDB: 2QFD chain G(all domains)
UniProt: O95786 (all domains)
Gene: RIGI

Molecule: Probable ATP-dependent RNA helicase DDX58

3D Structure

Loading viewer...

Related Domains

Browse other domains in RIG-I_C-RD →

Classification

AArchitecturebeta complex topology(a.5)

XX-groupETN0001 domain-like(708)

HH-groupETN0001 domain-like(708.1)

TT-groupMss4-like(708.1.2)

FFamilyRIG-I_C-RD(708.1.2.7)

Ligands

in contact, ≤ 4 Å

MERCURY (II) IONHG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF11648RIG-I_C-RD

C-terminal domain of RIG-I

ClanCL0080Beta-tent

External Links

ECOD PDB View: 2QFD RCSB PDB: 2QFD PDBe: 2QFD UniProt: O95786

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure