ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3c5oD1 - ECOD Domain | ECOD

ECOD/Domains/e3c5oD1

e3c5oD1

UID: 000336327

PDB

Range: D:2-153
PDB: 3C5O chain D(all domains)
UniProt: P61167 (all domains)
Gene: RPA1785

Molecule: UPF0311 protein RPA1785

3D Structure

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Related Domains

Browse other domains in DUF3237 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupLipocalins/Streptavidin(9)

HH-groupAOC barrel-like(9.13)

TT-groupAOC barrel-like(9.13.1)

FFamilyDUF3237(9.13.1.4)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF11578DUF3237

Protein of unknown function (DUF3237)

ClanCL0650AOC_barrel

External Links

ECOD PDB View: 3C5O RCSB PDB: 3C5O PDBe: 3C5O UniProt: P61167

Downloads

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