ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2q16A1 - ECOD Domain | ECOD

ECOD/Domains/e2q16A1

e2q16A1

UID: 000336497

PDB

Range: A:1-197
PDB: 2Q16 chain A(all domains)
UniProt: P52061 (all domains)
Gene: rdgB

Molecule: HAM1 protein homolog

3D Structure

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Related Domains

Browse other domains in Ham1p_like →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupITPase-like(7504)

HH-groupITPase-like(7504.1)

TT-groupITPase-like(7504.1.1)

FFamilyHam1p_like(7504.1.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
INOSINE 5'-TRIPHOSPHATEITT
Sodium ionNA
metal

Pfam Families

PF01725Ham1p_like

Ham1 family

ClanCL0269Maf

External Links

ECOD PDB View: 2Q16 RCSB PDB: 2Q16 PDBe: 2Q16 UniProt: P52061

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.