ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3c5eA2 - ECOD Domain | ECOD

ECOD/Domains/e3c5eA2

e3c5eA2

UID: 000336732

PDB

Range: A:459-569
PDB: 3C5E chain A(all domains)
UniProt: Q08AH3 (all domains)
Gene: ACSM2A

Molecule: Acyl-coenzyme A synthetase ACSM2A, mitochondrial precursor

3D Structure

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Related Domains

Browse other domains in AMP-binding_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-lytic protease prodomain-like(327)

HH-groupa+b domain in acetyl-CoA synthetase-like proteins(327.5)

TT-groupa+b domain in acetyl-CoA synthetase-like proteins(327.5.1)

FFamilyAMP-binding_C(327.5.1.2)

Ligands

in contact, ≤ 4 Å

ATPATP
drugDrugBank DB00171
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13193AMP-binding_C

AMP-binding enzyme C-terminal domain

ClanCL0531AMP-binding_C

External Links

ECOD PDB View: 3C5E RCSB PDB: 3C5E PDBe: 3C5E UniProt: Q08AH3

Downloads

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