ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2pwyB2 - ECOD Domain | ECOD

ECOD/Domains/e2pwyB2

e2pwyB2

UID: 000336886

PDB

Range: B:61-254
PDB: 2PWY chain B(all domains)
UniProt: Q8GBB2 (all domains)
Gene: trmI

Molecule: tRNA (adenine-N(1)-)-methyltransferase

3D Structure

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Related Domains

Browse other domains in GCD14 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyGCD14(2003.1.5.69)

Ligands

in contact, ≤ 4 Å

S-adenosyl-L-homocysteineSAH
drugDrugBank DB01752

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

tRNA methyltransferase complex GCD14 subunit

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 2PWY RCSB PDB: 2PWY PDBe: 2PWY UniProt: Q8GBB2

Downloads

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Drug annotations from DrugDomain.