ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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I1MPU8_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/I1MPU8_F1_nD3

I1MPU8_F1_nD3

UID: 003369489

AlphaFold

Range: 1096-1155
AlphaFold: AF-I1MPU8
UniProt: I1MPU8 (all domains)
Gene: LOC102659840

Protein: Protein SHORTAGE IN CHIASMATA 1

3D Structure

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Related Domains

Browse other domains in SHOC1_2HhH →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHhH/H2TH(102)

HH-groupSAM/DNA-glycosylase(102.1)

TT-groupSAM domain-like(102.1.1)

FFamilySHOC1_2HhH(102.1.1.122)

Pfam Families

PF28629SHOC1_2HhH

SHOC1 Helix-hairpin-helix tandem

ClanCL0198HHH

External Links

AlphaFold DB: I1MPU8 UniProt: I1MPU8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1096-1155