ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3bj911 - ECOD Domain | ECOD

ECOD/Domains/e3bj911

e3bj911

UID: 000337090

PDB

Range: 1:3-118
PDB: 3BJ9 chain 1(all domains)
UniProt: P12018 (all domains)
Gene: VPREB1

Molecule: Immunoglobulin iota chain, Immunoglobulin lambda-like polypeptide 1

3D Structure

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Related Domains

Browse other domains in V-set →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyV-set(11.1.1.99)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Immunoglobulin V-set domain

ClanCL0159E-set

External Links

ECOD PDB View: 3BJ9 RCSB PDB: 3BJ9 PDBe: 3BJ9 UniProt: P12018

Downloads

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