ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2vfxB1 - ECOD Domain | ECOD

ECOD/Domains/e2vfxB1

e2vfxB1

UID: 000338167

PDB

Range: B:0-205
PDB: 2VFX chain B(all domains)
UniProt: Q13257 (all domains)
Gene: MAD2L1

Molecule: MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2A

3D Structure

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Related Domains

Browse other domains in HORMA →

Classification

AArchitecturea+b two layers(a.11)

XX-groupThe spindle assembly checkpoint protein mad2(859)

HH-groupThe spindle assembly checkpoint protein mad2(859.1)

TT-groupThe spindle assembly checkpoint protein mad2(859.1.1)

FFamilyHORMA(859.1.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Magnesium ionMG
metal

+ 2 additives (3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL)

3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL

Pfam Families

HORMA domain

ClanCL0651Mad2

External Links

ECOD PDB View: 2VFX RCSB PDB: 2VFX PDBe: 2VFX UniProt: Q13257

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOLPE4

within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.