ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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I1KPB4_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/I1KPB4_F1_nD4

I1KPB4_F1_nD4

UID: 003383035

AlphaFold

Range: 556-740
AlphaFold: AF-I1KPB4
UniProt: I1KPB4 (all domains)
Gene: LOC100776096

Protein: UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE homolog, chloroplastic

3D Structure

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Related Domains

Browse other domains in Mur_ligase_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupMurD-like peptide ligases, peptide-binding domain(7570)

HH-groupMurD-like peptide ligases, peptide-binding domain(7570.1)

TT-groupMurD-like peptide ligases, peptide-binding domain(7570.1.1)

FFamilyMur_ligase_C(7570.1.1.1)

Pfam Families

PF02875Mur_ligase_C

Mur ligase, glutamate ligase domain

ClanCL0794Mur_ligase_C_sf

External Links

AlphaFold DB: I1KPB4 UniProt: I1KPB4

Representative

This domain is classified based on similarity to:

Downloads

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Domain coordinates: residues 556-740