ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3bxoB1 - ECOD Domain | ECOD

ECOD/Domains/e3bxoB1

e3bxoB1

UID: 000338324

PDB

Range: B:2-237
PDB: 3BXO chain B(all domains)
UniProt: Q9ZGH6 (all domains)
Gene: desVI

Molecule: N,N-dimethyltransferase

3D Structure

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Related Domains

Browse other domains in Methyltransf_23, Methyltransf_25 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltransf_23, Methyltransf_25(2003.1.5.151)

Ligands

in contact, ≤ 4 Å

AdemetionineSAM
drugDrugBank DB00118
Phenyl-uridine-5'-diphosphateUPP
drugDrugBank DB02790

+ 1 additive (1,2-ETHANEDIOL)

Pfam Families

PF13489Methyltransf_23

Methyltransferase domain

ClanCL0063NADP_Rossmann

PF13649Methyltransf_25

Methyltransferase domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 3BXO RCSB PDB: 3BXO PDBe: 3BXO UniProt: Q9ZGH6

Downloads

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1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.