ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2ri1B1 - ECOD Domain | ECOD

ECOD/Domains/e2ri1B1

e2ri1B1

UID: 000338556

PDB

Range: B:-1-233
PDB: 2RI1 chain B(all domains)
UniProt: Q8DV70 (all domains)
Gene: nagB

Molecule: Glucosamine-6-phosphate deaminase

3D Structure

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Related Domains

Browse other domains in Glucosamine_iso →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNagB/RpiA/CoA transferase-like(2003.1.7)

FFamilyGlucosamine_iso(2003.1.7.4)

Ligands

in contact, ≤ 4 Å

Glucosamine 6-PhosphateGLP
drugDrugBank DB02657

+ 1 additive (2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL)

2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOLBTB

Shown in the structure viewer.

Pfam Families

PF01182Glucosamine_iso

Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 2RI1 RCSB PDB: 2RI1 PDBe: 2RI1 UniProt: Q8DV70

Downloads

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Drug annotations from DrugDomain.