ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9PJA1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q9PJA1_F1_nD1

Q9PJA1_F1_nD1

UID: 003387045

AlphaFold

Range: 11-190
AlphaFold: AF-Q9PJA1
UniProt: Q9PJA1 (all domains)
Gene: rnhB

Protein: Ribonuclease HII (RNase HII) (EC 3.1.26.4)

3D Structure

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Related Domains

Browse other domains in RNase_HII →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyRNase_HII(2484.1.1.16)

Pfam Families

PF01351RNase_HII

Ribonuclease HII

ClanCL0219RNase_H

External Links

AlphaFold DB: Q9PJA1 UniProt: Q9PJA1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 11-190