ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q9VYT3_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q9VYT3_F1_nD3

Q9VYT3_F1_nD3

UID: 003395101

AlphaFold

Range: 586-825
AlphaFold: AF-Q9VYT3
UniProt: Q9VYT3 (all domains)
Gene: Nrd1

Protein: FI23714p1 (Nardilysin (EC 3.4.24.-))

3D Structure

Loading viewer...

Related Domains

Browse other domains in Peptidase_M16_M →

Classification

AArchitecturea+b two layers(a.11)

XX-groupLuxS, MPP, ThrRS/AlaRS common domain(309)

HH-groupLuxS, MPP, ThrRS/AlaRS common domain(309.1)

TT-groupLuxS/MPP-like metallohydrolase(309.1.1)

FFamilyPeptidase_M16_M(309.1.1.8)

Pfam Families

PF16187Peptidase_M16_M

Middle or third domain of peptidase_M16

ClanCL0094Peptidase_ME

External Links

AlphaFold DB: Q9VYT3 UniProt: Q9VYT3

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 586-825