ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A1Z8U0_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/A1Z8U0_F1_nD3

A1Z8U0_F1_nD3

UID: 003396602

AlphaFold

Range: 871-1235
AlphaFold: AF-A1Z8U0
UniProt: A1Z8U0 (all domains)
Gene: Prp8

Protein: Pre-mRNA-processing-splicing factor 8 (Splicing factor Prp8)

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyRRM_4(304.48.1.25)

Pfam Families

RNA recognition motif of the spliceosomal PrP8

External Links

AlphaFold DB: A1Z8U0 UniProt: A1Z8U0

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 871-1235