ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8SYP9_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q8SYP9_F1_nD2

Q8SYP9_F1_nD2

UID: 003400994

AlphaFold

Range: 146-235
AlphaFold: AF-Q8SYP9
UniProt: Q8SYP9 (all domains)
Gene: mRpS5

Protein: Small ribosomal subunit protein uS5m (28S ribosomal protein S5, mitochondrial)

3D Structure

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Related Domains

Browse other domains in Ribosomal_S5 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupdsRBD-like(330)

HH-groupdsRNA-binding domain-like(330.1)

TT-groupdsRNA-binding domain-like(330.1.1)

FFamilyRibosomal_S5(330.1.1.2)

Pfam Families

PF00333Ribosomal_S5

Ribosomal protein S5, N-terminal domain

ClanCL0196DSRM

External Links

AlphaFold DB: Q8SYP9 UniProt: Q8SYP9

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 146-235