ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A1Z9A8_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A1Z9A8_F1_nD1

A1Z9A8_F1_nD1

UID: 003403322

RepresentativeAlphaFold

Range: 41-650
AlphaFold: AF-A1Z9A8
UniProt: A1Z9A8 (all domains)
Gene: Ptcd3

Protein: Small ribosomal subunit protein mS39 (Pentatricopeptide repeat domain-containing protein 3 homolog, mitochondrial)

3D Structure

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Related Domains

Browse other domains in PPR_3, Rib_mS39_PPR →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyPPR_3, Rib_mS39_PPR(109.4.1.1436)

Pfam Families

Pentatricopeptide repeat domain

ClanCL0020TPR

PF22330Rib_mS39_PPR

Small ribosomal subunit protein mS39, PPR

ClanCL0020TPR

External Links

AlphaFold DB: A1Z9A8 UniProt: A1Z9A8

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 41-650